Hotels in Nagasaki Prefecture

Search and compare Nagasaki Prefecture hotels from hundreds of travel sites on HotelsCombined and save.

...and more

Learn why travelers love HotelsCombined

Compare hotel ratings collected from thousands of user reviews.

One search gives you accurate pricing on affordable hotels.

Customize your results by hotel chain, amenities, price and more.

Search for hotels as many times as you want – for free.

Refine Your Search

Star ratings
Guest Ratings
Amenities
Freebies
See all filters

Popular hotels in Nagasaki Prefecture

Discover well-known properties in Nagasaki Prefecture that are favored by visitors more than others. There are 955 hotels in Nagasaki Prefecture and price data was last updated on April 11, 2026. The average price for a hotel in Nagasaki Prefecture is $130/night.
Enter your travel dates to find the best prices.
Filter by star ratings
All filters
771-1 Imayashiki, Izuhara-Machi, Tsushima, Japan
Along with self parking, this smoke-free hotel has a microwave in a common area and a business center. Free buffet breakfast and free WiFi in public areas are also provided. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Weekly housekeeping is available. Toyoko Inn Tsushima Izuhara offers 245 accommodations with slippers and hair dryers. Flat-screen televisions come with pay movies. Bathrooms include shower/tub combinations, bidets, and complimentary toiletries. This Tsushima hotel provides complimentary wired and wireless Internet access. Business-friendly amenities include desks and phones. Housekeeping is offered weekly and irons/ironing boards can be requested. Housekeeping is provided on a limited basis.
Free Wi-Fi
8.6
Excellent
896 reviews
Location
0.2 mi from city centre
10 Huis Ten Bosch Cho, Sasebo, Japan
3 restaurants, a bar/lounge, and self parking are available at this hotel. WiFi in public areas is free. Other amenities include dry cleaning, a 24-hour front desk, and wedding services. Hotel Okura JR Huis Ten Bosch offers 320 air-conditioned accommodations with complimentary bottled water and slippers. Beds feature down comforters and premium bedding. 40-inch LCD televisions come with satellite channels. Bathrooms include shower/tub combinations with deep soaking bathtubs, bidets, complimentary toiletries, and hair dryers. Guests can surf the web using the complimentary wireless Internet access. Housekeeping is offered daily and irons/ironing boards can be requested. The recreational activities listed below are available either on site or nearby; fees may apply.
Free Wi-Fi
9.0
Excellent
2976 reviews
Location
8.8 mi from city centre
7-24 Douza-Machi, Nagasaki, Japan
This hotel features a restaurant, a sauna, and dry cleaning. WiFi in public areas is free. Other amenities include laundry facilities, a 24-hour front desk, and a TV in a common area. Dormy Inn Nagasaki Shinchi Chinatown Hot Spring offers 187 air-conditioned accommodations with bathrobes and slippers. Beds feature down comforters and premium bedding. Flat-screen televisions come with digital channels. Bathrooms include shower/tub combinations, bidets, complimentary toiletries, and hair dryers. This Nagasaki hotel provides complimentary wired and wireless Internet access. Housekeeping is offered daily and irons/ironing boards can be requested. Recreational amenities at the hotel include a sauna. Children under 13 years old are not allowed in the hot tub without adult supervision.
Free Wi-Fi
Spa
8.3
Excellent
2075 reviews
Location
3.9 mi from city centre
320 Unzen Obama Cho, Unzen, Japan
Located in Unzen in the Nagasaki region, Yuyado Unzen Shinyu provides accommodation with free WiFi and free private parking, as well as access to a hot spring bath. This 3-star ryokan offers a lift and full-day security. The ryokan has family rooms. Every unit features a private bathroom and bath, air conditioning, a flat-screen TV and a fridge. The units will provide guests with a tatami and a kettle. There is a coffee shop on-site. The ryokan is located in a geothermal area, with a number of hot springs nearby for guests to relax in. Guests at the ryokan can enjoy cycling nearby, or make the most of the garden. Nagasaki Museum of History is 47 km from Yuyado Unzen Shinyu, while Nagasaki Station is 48 km away. Amakusa Airport is 45 km from the property.
Free Wi-Fi
Parking
8.9
Excellent
50 reviews
Location
8.0 mi from city centre
Huis Ten Bosch 7-7, Sasebo, Japan
Along with 3 restaurants, this smoke-free hotel has a bar/lounge and a coffee shop/cafe. WiFi in public areas is free. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Hotel Europe Huis Ten Bosch offers 310 air-conditioned accommodations with safes and complimentary bottled water. Each accommodation is individually decorated. Refrigerators and coffee/tea makers are provided. Bathrooms include separate bathtubs and showers, bathrobes, slippers, and bidets. This Sasebo hotel provides complimentary wireless Internet access. Business-friendly amenities include desks and desk chairs. Additionally, rooms include hair dryers and complimentary toiletries. Housekeeping is provided daily. The recreational activities listed below are available either on site or nearby; fees may apply.
Free Wi-Fi
Parking
8.9
Excellent
403 reviews
Location
8.9 mi from city centre
6 Huis Ten Bosch, Sasebo, Japan
2 restaurants, self parking, and a microwave in a common area are available at this hotel. WiFi in public areas is free. Other amenities include dry cleaning, a 24-hour front desk, and a garden. Housekeeping is not available. Hotel Nikko Huis Ten Bosch offers 377 accommodations with safes and complimentary bottled water. Beds feature down comforters and premium bedding. Cable television is provided. Bathrooms include showers, slippers, complimentary toiletries, and hair dryers. This Sasebo hotel provides complimentary wireless Internet access. Business-friendly amenities include desks and phones.
Free Wi-Fi
8.6
Excellent
2925 reviews
Location
8.6 mi from city centre
1-1Onoue, Nagasaki, Japan
Dry cleaning, laundry facilities, and a 24-hour front desk are available at this hotel. WiFi in public areas is free. Other amenities include a vending machine. JR KYUSHU HOTEL Nagasaki offers 144 accommodations with slippers and hair dryers. Flat-screen televisions come with digital channels. Bathrooms include shower/tub combinations with deep soaking bathtubs, bidets, toilets with an electronic bidet, and complimentary toiletries. Guests can surf the web using the complimentary wireless Internet access. Business-friendly amenities include desks and desk chairs. Housekeeping is provided daily.
Free Wi-Fi
Spa
8.7
Excellent
3516 reviews
Location
3.2 mi from city centre
1453 Kokubu Izuharamachi, Tsushima, Japan
With a stay at Temple Stay Tsushima Seizanji in Tsushima, you'll be within a 5-minute walk of Tsushima City Office and Tsushima Folk History Museum. This guesthouse is 0. 3 mi (0. 4 km) from Iki-Tsushima Quasi-National Park and 0. 3 mi (0. 5 km) from Banshoin Temple. Take in the views from a garden and make use of amenities such as complimentary wireless Internet access. The front desk is staffed during limited hours. Self parking (subject to charges) is available onsite. Make yourself at home in one of the 3 guestrooms featuring refrigerators. Complimentary wireless Internet access is available to keep you connected. Private bathrooms with shower/tub combinations feature deep soaking bathtubs and complimentary toiletries. Conveniences include desks, and housekeeping is provided daily.
Free Wi-Fi
9.0
Excellent
297 reviews
Location
0.4 mi from city centre
2-26 Takaramachi, Nagasaki, Japan
2 restaurants, a coffee shop/cafe, and self parking are available at this hotel. WiFi in public areas is free. Additionally, concierge services, dry cleaning, and a 24-hour front desk are onsite. Housekeeping is available on request. THE GLOBAL VIEW Nagasaki offers 181 air-conditioned accommodations with safes and complimentary bottled water. Beds feature premium bedding. 32-inch flat-screen televisions come with digital channels. Bathrooms include shower/tub combinations, slippers, bidets, and complimentary toiletries. This Nagasaki hotel provides complimentary wireless Internet access, with a speed of 25+ Mbps. Business-friendly amenities include desks and desk chairs. In-room massages, irons/ironing boards, and change of towels can be requested. Housekeeping is provided daily.
Free Wi-Fi
8.9
Excellent
2287 reviews
Location
2.9 mi from city centre
2520 Okubo-Cho, Hirado, Japan
While you're here, you can enjoy all the comforts of home and more, including a soaking tub and a rainfall showerhead, as well as free WiFi and a flat-screen TV. Other amenities include a freezer, a hair dryer, towels, and slippers.
Free Wi-Fi
Parking
7.4
Good
427 reviews
Location
0.4 mi from city centre

Travel insights for hotels in Nagasaki Prefecture

Use our HotelsCombined data-powered tips to help you find your next hotel in Nagasaki Prefecture.

What is the cheapest month to book a hotel in Nagasaki Prefecture?

The cheapest month to book a hotel in Nagasaki Prefecture is February ($83). Conversely, the most expensive month to stay in Nagasaki Prefecture is October ($216).

What is the cheapest day to stay in a hotel in Nagasaki Prefecture?

The cheapest day to stay in Nagasaki Prefecture is Sunday ($104). On the other hand, travelers can expect to pay the most on Saturday, when the average nightly price is $167.

How much is a hotel in Nagasaki Prefecture tonight?

Users have found prices for hotels in Nagasaki Prefecture tonight starting as low as $28, rising to an average cost of $159, based on searches in the last 72 hours. Prices start from $40 for a 4-star hotel in Nagasaki Prefecture for tonight.

How much is a Nagasaki Prefecture hotel room this weekend?

In the past 72 hours, we’ve seen prices for hotels in Nagasaki Prefecture this weekend for as little as $31/night. If you’re specifically looking for a 3-star hotel this weekend, our users have found prices as low as $31/night. For a 4-star hotel in Nagasaki Prefecture, the cheapest rate recently found was $48/night for this weekend.

How far ahead should you book a hotel in Nagasaki Prefecture?

Save money by booking a hotel at least 3 days before your trip to Nagasaki Prefecture. The lowest price found when booking 3 days ahead was $72 per night.

Top-rated Nagasaki Prefecture hotels

Browse through properties in Nagasaki Prefecture that have received the highest ratings from guests. There are currently 955 properties in Nagasaki Prefecture and data was last updated on April 11, 2026.
Some of the very best Nagasaki Prefecture hotels as rated by our users. Make sure to read hotel descriptions and reviews to find the right property right for you.
567-1 Naganogo, Hasami, Japan
2.2 mi from city centre
Free Wi-Fi
Parking
$41
Avg. per night
7-9 Huis Ten Bosch-Cho, Sasebo, Japan
9.1 mi from city centre
Free Wi-Fi
Parking
$159
Avg. per night
320 Obamacho Unzen, Unzen, Japan
7.9 mi from city centre
Spa
$276
Avg. per night
1-20 Edo-Machi, Nagasaki, Japan
3.6 mi from city centre
Free Wi-Fi
$40
Avg. per night
Dozamachi 3-12, Nagasaki, Japan
3.9 mi from city centre
Free Wi-Fi
Spa
$61
Avg. per night
12-7 Shiomi-cho, Sasebo, Japan
2.5 mi from city centre
Free Wi-Fi
$51
Avg. per night
4-1 Miura-Cho, Sasebo, Japan
2.3 mi from city centre
Free Wi-Fi
$47
Avg. per night
5-24 Minato-machi, Sasebo, Japan
1.6 mi from city centre
Free Wi-Fi
$48
Avg. per night
760-1 Gonoura-Cho Honmurafure, Iki, Japan
0.3 mi from city centre
Free Wi-Fi
Parking
Airport shuttle
$98
Avg. per night

Cheapest hotels in Nagasaki Prefecture, Japan

Discover affordable stays in Nagasaki Prefecture that provide a quality experience without breaking the bank. Hotels in Nagasaki Prefecture can be found for as low as $23 per night. There is currently one property in Nagasaki Prefecture that can be booked for this price. Tsudoi Guest House is one of the hotels that can be booked for the lowest price in Nagasaki Prefecture. Price data was last updated on April 11, 2026
For those on a budget, these are the cheapest hotels available in Nagasaki Prefecture for the selected dates. Prices can differ depending on the dates selected, so use the search form to browse more options if you have flexibility.
323-2-2 Obama-Cho, Unzen, Japan
7.7 mi from city centre
Free Wi-Fi
Air Conditioning
$23
Avg. per night
7-16, Dozamachi, Nagasaki, Japan
4.0 mi from city centre
Free Wi-Fi
$27
Avg. per night
4-10 Chikugomachi, Nagasaki, Japan
3.4 mi from city centre
Free Wi-Fi
$34
Avg. per night
3F, 6-1 Motofuna-Machi, Nagasaki, Japan
3.5 mi from city centre
Free Wi-Fi
$35
Avg. per night
5-14 Nishizakamachi, Nagasaki, Japan
3.2 mi from city centre
Free Wi-Fi
$35
Avg. per night
6-38 Motoshikkuimachi, Nagasaki, Japan
4.1 mi from city centre
Spa
$36
Avg. per night
2190-11 Motegi-Machi, Nagasaki, Japan
7.5 mi from city centre
Free Wi-Fi
Parking
$36
Avg. per night
Matsuzatomachi 1538-1, Isahaya, Japan
5.0 mi from city centre
Free Wi-Fi
Parking
$37
Avg. per night
10-16 Hiranocho, Nagasaki, Japan
2.3 mi from city centre
Free Wi-Fi
$38
Avg. per night
4-28 Chikugomachi, Nagasaki, Japan
3.4 mi from city centre
Free Wi-Fi
$38
Avg. per night
1-22 Oura-machi, Nagasaki, Japan
4.0 mi from city centre
Free Wi-Fi
$39
Avg. per night
3-2 Kamikyo-machi, Sasebo, Japan
1.9 mi from city centre
Free Wi-Fi
$39
Avg. per night
9-2 Daikoku-Cho, Nagasaki, Japan
3.3 mi from city centre
Free Wi-Fi
$39
Avg. per night
9-2 Motofuna-machi, Nagasaki, Japan
3.5 mi from city centre
Free Wi-Fi
Spa
$39
Avg. per night
1-14 Shinchimachi, Nagasaki, Japan
3.9 mi from city centre
Free Wi-Fi
$40
Avg. per night
7-3 Daikokumachi, Nagasaki, Nagasaki, Japan
3.3 mi from city centre
Free Wi-Fi
$40
Avg. per night

Hotel prices in Nagasaki Prefecture

Get a sense of the average price and most popular properties to stay in Nagasaki Prefecture to help you budget for your trip accordingly. Hotels that are booked the most in each class receive the “Most popular” badge. Hotels with the “Best value” badge are the most popular hotels in Nagasaki Prefecture at attractive prices. Price data was last updated on April 11, 2026.
We've come across the following hotels in Nagasaki Prefecture with different price and hotel class options. We've highlighted the most popular properties according to our users as well as the best value within each hotel class.
3 stars
2 stars and under
3F, 6-1 Motofuna-Machi, Nagasaki, Japan
2190-11 Motegi-Machi, Nagasaki, Japan
960, Aza Daranoki, Hitakatsu, Tsushima, Japan

Other accommodations in Nagasaki Prefecture

Find the perfect hostel, theme hotel, or vacation rental for your stay in Nagasaki Prefecture. There are 955 hotels in Nagasaki Prefecture and price data was last updated on April 11, 2026. The average price for a stay in Nagasaki Prefecture is $130/night.
3F, 6-1 Motofuna-Machi, Nagasaki, Japan
3.5 mi from city centre
Free Wi-Fi
$35
Avg. per night
11-2 Mezame-Machi, Nagasaki, Japan
2.5 mi from city centre
Free Wi-Fi
Air Conditioning
$59
Avg. per night
7-16, Dozamachi, Nagasaki, Japan
4.0 mi from city centre
Free Wi-Fi
$27
Avg. per night

Where to stay in Nagasaki Prefecture

Explore different neighborhoods and areas within Nagasaki Prefecture to find the perfect location for your stay. Map data was last updated on April 11, 2026.
Scroll through the map to find hotels close to the Nagasaki Prefecture neighborhood(s) you plan on visiting. More information on a given hotel can be accessed by clicking the hotel's name within the map.

Facts about staying in Nagasaki Prefecture

Find useful tips and insights about staying in Nagasaki Prefecture to help you make the most of your experience. FAQs were last updated on April 11, 2026.
  • Where is the best place to stay in Nagasaki Prefecture?

    You can find several places worth visiting in Nagasaki Prefecture. Nagasaki, Sasebo, and Unzen are some of the most popular amongst our users.

  • What are the best hotels in Nagasaki Prefecture?

    Yumihari-no-Oka Hotel, rated with a score of 8.7 from 400 reviewers, is one of the most popular hotels in Nagasaki Prefecture. Other top stays include Sasebo Washington Hotel, with an average rating of 7.7 from 1,596 reviewers, and Candeo Hotels Nagasaki Shinchi Chinatown, with a score of 8.7 from 4,406 reviewers.

  • What is a good hotel near Huis Ten Bosch?

    Hotel Okura Jr Huis Ten Bosch is a popular hotel near Huis Ten Bosch that is highly recommended, with a score of 9.0 across 2,977 reviews.

  • What is a good hotel in Nagasaki Prefecture near Nagasaki Railway Station?

    The most popular hotel near Nagasaki Railway Station is Candeo Hotels Nagasaki Shinchi Chinatown, with 4,406 HotelsCombined users scoring it 8.7/10.

  • Is there a good hotel near Urakami Station?

    Close to Urakami Station you will find Jr Kyushu Hotel Nagasaki, which has a rating of 8.7 over 3,516 HotelsCombined reviews.

  • What is the cheapest city to visit in Nagasaki Prefecture?

    When considering a trip to Nagasaki Prefecture, keep in mind that the 1st cheapest city, Nagasaki, offers the most budget-friendly accommodations, with an average per night cost of $145. The second cheapest city, Shimabara, also provides an affordable option, with an average per night cost of $48.

  • What is the most popular city in Nagasaki Prefecture to stay in?

    The majority of our users searched for a place to stay in Nagasaki, making it the most popular city in Nagasaki Prefecture. The second most popular city in Nagasaki Prefecture is Sasebo, followed by Unzen.

  • What is the cheapest city to visit in Nagasaki Prefecture?

    The most popular hotel chain in Nagasaki Prefecture is Okura Hotels & Resorts. Though our users also frequently search for accommodations at Dormy Inn or Nikko Hotels Intl during their stay in Nagasaki Prefecture.

  • What are the most popular landmarks to visit in Nagasaki Prefecture?

    The top three landmarks in Nagasaki Prefecture are:
    • Huis Ten Bosch, which you can visit while staying in Sasebo
    • Nagasaki Railway Station, which you can visit while staying in Nagasaki
    • Urakami Station, which you can visit while staying in Nagasaki

See more FAQs

Find better results for your stay in Nagasaki Prefecture