Popular hotels
Insights
Top-rated hotels
Cheapest hotels
Where to stay

Hotels in Nagasaki Prefecture

Search and compare Nagasaki Prefecture hotels from hundreds of travel sites on HotelsCombined and save.

...and more

Learn why travelers love HotelsCombined

Compare hotel ratings collected from thousands of user reviews.

One search gives you accurate pricing on affordable hotels.

Customize your results by hotel chain, amenities, price and more.

Search for hotels as many times as you want – for free.

Show Map

Refine Your Search

Star ratings
Guest Ratings
Amenities
Freebies
See all filters

Popular hotels in Nagasaki Prefecture

Discover well-known properties in Nagasaki Prefecture that are favored by visitors more than others. There are 936 hotels in Nagasaki Prefecture and price data was last updated on October 23, 2025. The average price for a hotel in Nagasaki Prefecture is $142/night.
Enter your travel dates to find the best prices.

Sort by

Popular
PriceStarsReview ScoreDistance
Filter by star ratings
All filters
Luke Plaza Hotel
Luke Plaza Hotel

Luke Plaza Hotel

17-15 Enouramachi, Nagasaki, Japan
Hotel in Nagasaki with a 24-hour front desk and a coffee shop Along with a restaurant, this hotel has a bar/lounge and a coffee shop/cafe. Free WiFi in public areas and free self parking are also provided. Additionally, a 24-hour front desk, a front-desk safe, and a banquet hall are onsite. Luke Plaza Hotel offers 87 accommodations with slippers and hair dryers. Flat-screen televisions are featured in guestrooms. Bathrooms include separate bathtubs and showers, bidets, and complimentary toiletries. Guests can surf the web using the complimentary wireless Internet access. Business-friendly amenities include desks and phones. Housekeeping is provided daily.
Free Wi-Fi
Parking
8.6
Excellent
1355 reviews
Location
2.6 mi from city centre
$65
View Deal
Toyoko Inn Tsushima Izuhara
Toyoko Inn Tsushima Izuhara

Toyoko Inn Tsushima Izuhara

771-1 Imayashiki, Izuhara-Machi, Tsushima, Japan
Hotel with free breakfast, a quick walk to Tsushima City Office Along with self parking, this smoke-free hotel has a microwave in a common area and a business center. Free buffet breakfast and free WiFi in public areas are also provided. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Weekly housekeeping is available. Toyoko Inn Tsushima Izuhara offers 245 accommodations with slippers and hair dryers. Flat-screen televisions come with pay movies. Bathrooms include shower/tub combinations, bidets, and complimentary toiletries. This Tsushima hotel provides complimentary wired and wireless Internet access. Business-friendly amenities include desks and phones. Housekeeping is offered weekly and irons/ironing boards can be requested. Housekeeping is provided on a limited basis.
Free Wi-Fi
8.4
Excellent
794 reviews
Location
0.2 mi from city centre
$61
View Deal
Hotel Monterey Nagasaki
Hotel Monterey Nagasaki

Hotel Monterey Nagasaki

1-22 Oura-machi, Nagasaki, Japan
Hotel with a restaurant, steps from Tokiwa Pier Along with a restaurant, this smoke-free hotel has a coffee shop/cafe and self parking. WiFi in public areas is free. Other amenities include dry cleaning, a 24-hour front desk, and wedding services. Hotel Monterey Nagasaki offers 123 accommodations with safes and slippers. 32-inch flat-screen televisions come with cable channels and pay movies. Bathrooms include shower/tub combinations, bidets, complimentary toiletries, and hair dryers. Guests can surf the web using the complimentary wired and wireless Internet access. Housekeeping is offered daily and in-room massages can be requested.
Free Wi-Fi
8.5
Excellent
2674 reviews
Location
4.0 mi from city centre
$47
View Deal
Yuyado Unzen Shinyu
Yuyado Unzen Shinyu

Yuyado Unzen Shinyu

320 Unzen Obama Cho, Unzen, Japan
Located in Unzen in the Nagasaki region, Yuyado Unzen Shinyu provides accommodation with free WiFi and free private parking, as well as access to a hot spring bath. This 3-star ryokan offers a lift and full-day security. The ryokan has family rooms. Every unit features a private bathroom and bath, air conditioning, a flat-screen TV and a fridge. The units will provide guests with a tatami and a kettle. There is a coffee shop on-site. The ryokan is located in a geothermal area, with a number of hot springs nearby for guests to relax in. Guests at the ryokan can enjoy cycling nearby, or make the most of the garden. Nagasaki Museum of History is 47 km from Yuyado Unzen Shinyu, while Nagasaki Station is 48 km away. Amakusa Airport is 45 km from the property.
Free Wi-Fi
Parking
9.1
Excellent
34 reviews
Location
8.0 mi from city centre
$218
View Deal
Toyoko Inn Sasebo Ekimae
Toyoko Inn Sasebo Ekimae

Toyoko Inn Sasebo Ekimae

Miura-Cho 1-4, Sasebo, Japan
Hotel with free breakfast, steps from Miuracho Catholic Church Self parking, laundry facilities, and a 24-hour front desk are available at this hotel. Free buffet breakfast and free WiFi in public areas are also provided. Other amenities include a vending machine. Weekly housekeeping is available. Toyoko Inn Sasebo Ekimae offers 272 air-conditioned accommodations with slippers and hair dryers. Flat-screen televisions are featured in guestrooms. Bathrooms include shower/tub combinations with deep soaking bathtubs, bidets, and complimentary toiletries. This Sasebo hotel provides complimentary wireless Internet access. Business-friendly amenities include desks and phones. Housekeeping is provided weekly.
Free Wi-Fi
8.1
Excellent
324 reviews
Location
2.3 mi from city centre
$56
View Deal
Dormy Inn Nagasaki Shinchichukagai
Dormy Inn Nagasaki Shinchichukagai

Dormy Inn Nagasaki Shinchichukagai

7-24 Douza-Machi, Nagasaki, Japan
Central hotel with a sauna connected to the convention center in Nagasaki Along with a restaurant, this hotel has a sauna and self parking. WiFi in public areas is free. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Dormy Inn Nagasaki Shinchi Chinatown Hot Spring offers 187 air-conditioned accommodations with bathrobes and slippers. Beds feature down comforters and premium bedding. Flat-screen televisions come with digital channels. Bathrooms include shower/tub combinations, bidets, complimentary toiletries, and hair dryers. This Nagasaki hotel provides complimentary wired and wireless Internet access. Housekeeping is offered daily and irons/ironing boards can be requested. Recreational amenities at the hotel include a sauna. Children under 13 years old are not allowed in the hot tub without adult supervision.
Free Wi-Fi
Spa
8.3
Excellent
1902 reviews
Location
3.9 mi from city centre
$66
View Deal
The Global View Nagasaki
The Global View Nagasaki

The Global View Nagasaki

2-26 Takaramachi, Nagasaki, Japan
Hotel in Nagasaki with 2 restaurants and a 24-hour front desk 2 restaurants, a coffee shop/cafe, and self parking are available at this hotel. WiFi in public areas is free. Additionally, concierge services, dry cleaning, and a 24-hour front desk are onsite. Housekeeping is available on request. THE GLOBAL VIEW Nagasaki offers 181 air-conditioned accommodations with safes and complimentary bottled water. Beds feature premium bedding. 32-inch flat-screen televisions come with digital channels. Bathrooms include shower/tub combinations, slippers, bidets, and complimentary toiletries. This Nagasaki hotel provides complimentary wireless Internet access, with a speed of 25+ Mbps. Business-friendly amenities include desks and desk chairs. In-room massages, irons/ironing boards, and change of towels can be requested. Housekeeping is provided daily.
Free Wi-Fi
8.8
Excellent
1735 reviews
Location
2.9 mi from city centre
$73
View Deal
Hotel Europe Huis Ten Bosch
Hotel Europe Huis Ten Bosch

Hotel Europe Huis Ten Bosch

Huis Ten Bosch 7-7, Sasebo, Japan
Hotel with 3 restaurants, near Huis Ten Bosch 3 restaurants, a bar/lounge, and a coffee shop/cafe are available at this hotel. WiFi in public areas is free. Additionally, concierge services, dry cleaning, and laundry facilities are onsite. Hotel Europe Huis Ten Bosch offers 310 air-conditioned accommodations with safes and complimentary bottled water. Each accommodation is individually decorated. Refrigerators and coffee/tea makers are provided. Bathrooms include separate bathtubs and showers, bathrobes, slippers, and bidets. This Sasebo hotel provides complimentary wireless Internet access. Business-friendly amenities include desks and desk chairs. Additionally, rooms include hair dryers and complimentary toiletries. Housekeeping is provided daily. The recreational activities listed below are available either on site or nearby; fees may apply.
Free Wi-Fi
Parking
8.8
Excellent
334 reviews
Location
8.9 mi from city centre
$196
View Deal
Nagasaki Bus Terminal Hotel
Nagasaki Bus Terminal Hotel

Nagasaki Bus Terminal Hotel

1-14 Shinchimachi, Nagasaki, Japan
Hotel with a restaurant, steps from Nagasaki Dejima Along with a restaurant, this hotel has self parking and a microwave in a common area. WiFi in public areas is free. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Nagasaki Bus Terminal Hotel offers 150 accommodations with complimentary bottled water and slippers. Beds feature down comforters. 24-inch LCD televisions come with satellite channels and pay movies. Bathrooms include toilets with an electronic bidet, complimentary toiletries, hair dryers, and toothbrushes and toothpaste. This Nagasaki hotel provides complimentary wireless Internet access. Housekeeping is provided daily.
Free Wi-Fi
7.8
Good
573 reviews
Location
3.9 mi from city centre
$49
View Deal
Hotel New Nagasaki
Hotel New Nagasaki

Hotel New Nagasaki

14-5 Daikoku-Machi, Nagasaki, Japan
Hotel with 3 restaurants, steps from Amu Plaza Nagasaki This hotel features 3 restaurants, a bar/lounge, and a snack bar/deli. WiFi in public areas is free. Other amenities include a conference center, a business center, and conference space. Hotel New Nagasaki offers 153 air-conditioned accommodations with safes and complimentary bottled water. These individually decorated and furnished accommodations include desks. Beds feature down comforters. Refrigerators and coffee/tea makers are provided. Bathrooms include shower/tub combinations, slippers, bidets, and toilets with an electronic bidet. This Nagasaki hotel provides complimentary wired and wireless Internet access. 42-inch flat-screen televisions come with digital channels. Additionally, rooms include hair dryers and complimentary toiletries. Housekeeping is offered daily and irons/ironing boards can be requested.
Free Wi-Fi
8.8
Excellent
987 reviews
Location
3.3 mi from city centre
$77
View Deal
All 936 hotels in Nagasaki Prefecture

Travel insights for hotels in Nagasaki Prefecture

Use our HotelsCombined data-powered tips to help you find your next hotel in Nagasaki Prefecture.

What is the cheapest month to book a hotel in Nagasaki Prefecture?

The cheapest month to book a hotel in Nagasaki Prefecture is August ($79). Conversely, the most expensive month to stay in Nagasaki Prefecture is November ($252).

What is the cheapest day to stay in a hotel in Nagasaki Prefecture?

The cheapest day to stay in Nagasaki Prefecture is Sunday ($86). On the other hand, travelers can expect to pay the most on Wednesday, when the average nightly price is $216.

How much is a hotel in Nagasaki Prefecture tonight?

Users have found prices for hotels in Nagasaki Prefecture tonight starting as low as $34, rising to an average cost of $165, based on searches in the last 72 hours. Prices start from $43 for a 4-star hotel in Nagasaki Prefecture for tonight.

How much is a Nagasaki Prefecture hotel room this weekend?

In the past 72 hours, we’ve seen prices for hotels in Nagasaki Prefecture this weekend for as little as $47/night. If you’re specifically looking for a 3-star hotel this weekend, our users have found prices as low as $47/night. For a 4-star hotel in Nagasaki Prefecture, the cheapest rate recently found was $84/night for this weekend.

How far ahead should you book a hotel in Nagasaki Prefecture?

Save money by booking a hotel at least 3 days before your trip to Nagasaki Prefecture. The lowest price found when booking 3 days ahead was $66 per night.
Find deals

Top-rated Nagasaki Prefecture hotels

Browse through properties in Nagasaki Prefecture that have received the highest ratings from guests. There are currently 936 properties in Nagasaki Prefecture and data was last updated on October 23, 2025.
Some of the very best Nagasaki Prefecture hotels as rated by our users. Make sure to read hotel descriptions and reviews to find the right property right for you.
Hotel Blissvilla Hasami
Hotel Blissvilla Hasami

Hotel Blissvilla Hasami

567-1 Naganogo, Hasami, Japan
2.2 mi from city centre
Free Wi-Fi
Parking
$51
Avg. per night
View Deal
Hotel Rotterdam Huis Ten Bosch
Hotel Rotterdam Huis Ten Bosch

Hotel Rotterdam Huis Ten Bosch

Huis Ten Bosch-Cho 6-5, Sasebo, Japan
8.5 mi from city centre
Free Wi-Fi
Air Conditioning
$78
Avg. per night
View Deal
Hotel Concerto Nagasaki
Hotel Concerto Nagasaki

Hotel Concerto Nagasaki

10-16 Hiranocho, Nagasaki, Japan
2.3 mi from city centre
Free Wi-Fi
$60
Avg. per night
View Deal
Candeo Hotels Nagasaki Shinchi Chinatown
Candeo Hotels Nagasaki Shinchi Chinatown

Candeo Hotels Nagasaki Shinchi Chinatown

Dozamachi 3-12, Nagasaki, Japan
3.9 mi from city centre
Free Wi-Fi
$55
Avg. per night
View Deal
Hotel Den Haag Huis Ten Bosch
Hotel Den Haag Huis Ten Bosch

Hotel Den Haag Huis Ten Bosch

7-9 Huis Ten Bosch-Cho, Sasebo, Japan
9.1 mi from city centre
Free Wi-Fi
Parking
$75
Avg. per night
View Deal
Kishotei
Kishotei

Kishotei

2520 Okubo-Cho, Hirado, Japan
0.4 mi from city centre
Free Wi-Fi
Parking
$78
Avg. per night
View Deal
Unzen Kyushu Hotel
Unzen Kyushu Hotel

Unzen Kyushu Hotel

320 Obamacho Unzen, Unzen, Japan
7.9 mi from city centre
Free Wi-Fi
Parking
$283
Avg. per night
View Deal
Daemado Hotel Hitakatsu
Daemado Hotel Hitakatsu

Daemado Hotel Hitakatsu

960, Aza Daranoki, Hitakatsu, Tsushima, Japan
32.6 mi from city centre
Free Wi-Fi
Parking
$59
Avg. per night
View Deal
Apa Hotel Nagasaki Ekimae
Apa Hotel Nagasaki Ekimae

Apa Hotel Nagasaki Ekimae

2-1 Daikoku-Machi, Nagasaki, Japan
3.2 mi from city centre
Free Wi-Fi
$50
Avg. per night
View Deal
Hotel Nikko Huis Ten Bosch
Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

6 Huis Ten Bosch, Sasebo, Japan
8.6 mi from city centre
Free Wi-Fi
$93
Avg. per night
View Deal
Sasebo Washington Hotel
Sasebo Washington Hotel

Sasebo Washington Hotel

12-7 Shiomi-cho, Sasebo, Japan
2.5 mi from city centre
Free Wi-Fi
$54
Avg. per night
View Deal
Sasebo Green Hotel
Sasebo Green Hotel

Sasebo Green Hotel

4-1 Miura-Cho, Sasebo, Japan
2.3 mi from city centre
Free Wi-Fi
$48
Avg. per night
View Deal
Shimabara Station Hotel
Shimabara Station Hotel

Shimabara Station Hotel

Imagawamachi 930, Shimabara, Japan
0.3 mi from city centre
Free Wi-Fi
Air Conditioning
$57
Avg. per night
View Deal
Quintessa Hotel Sasebo
Quintessa Hotel Sasebo

Quintessa Hotel Sasebo

5-24 Minato-machi, Sasebo, Japan
1.6 mi from city centre
Free Wi-Fi
$56
Avg. per night
View Deal
Iki Stellacote Taiankaku
Iki Stellacote Taiankaku

Iki Stellacote Taiankaku

760-1 Gonoura-Cho Honmurafure, Iki, Japan
0.3 mi from city centre
Free Wi-Fi
Parking
Airport shuttle
$116
Avg. per night
View Deal

Cheapest hotels in Nagasaki Prefecture, Japan

Discover affordable stays in Nagasaki Prefecture that provide a quality experience without breaking the bank. Hotels in Nagasaki Prefecture can be found for as low as $24 per night. There is currently one property in Nagasaki Prefecture that can be booked for this price. Tsudoi Guest House is one of the hotels that can be booked for the lowest price in Nagasaki Prefecture. Price data was last updated on October 23, 2025
For those on a budget, these are the cheapest hotels available in Nagasaki Prefecture for the selected dates. Prices can differ depending on the dates selected, so use the search form to browse more options if you have flexibility.
Tsudoi Guest House
Tsudoi Guest House

Tsudoi Guest House

323-2-2 Obama-Cho, Unzen, Japan
7.7 mi from city centre
Free Wi-Fi
Air Conditioning
$24
Avg. per night
View Deal
Capsule Inn Koyokan
Capsule Inn Koyokan

Capsule Inn Koyokan

7-9 Kabashimamachi, Nagasaki, Japan
3.6 mi from city centre
$32
Avg. per night
View Deal
Casa Blanca Guesthouse
Casa Blanca Guesthouse

Casa Blanca Guesthouse

7-16, Dozamachi, Nagasaki, Japan
4.0 mi from city centre
Free Wi-Fi
$32
Avg. per night
View Deal
Nagasaki House Burabura
Nagasaki House Burabura

Nagasaki House Burabura

2190-11 Motegi-Machi, Nagasaki, Japan
7.5 mi from city centre
Free Wi-Fi
Parking
$36
Avg. per night
View Deal
Hostel Casa Noda
Hostel Casa Noda

Hostel Casa Noda

3F, 6-1 Motofuna-Machi, Nagasaki, Japan
3.5 mi from city centre
Free Wi-Fi
$38
Avg. per night
View Deal
Pal Hotel Isahaya (Adult Only)
Pal Hotel Isahaya (Adult Only)

Pal Hotel Isahaya (Adult Only)

Matsuzatomachi 1538-1, Isahaya, Japan
5.0 mi from city centre
Free Wi-Fi
Parking
$39
Avg. per night
View Deal
Saint Hill Nagasaki
Saint Hill Nagasaki

Saint Hill Nagasaki

4-10 Chikugomachi, Nagasaki, Japan
3.4 mi from city centre
$40
Avg. per night
View Deal
Richmond Hotel Nagasaki Shianbashi
Richmond Hotel Nagasaki Shianbashi

Richmond Hotel Nagasaki Shianbashi

6-38 Motoshikkuimachi, Nagasaki, Japan
4.1 mi from city centre
Spa
$41
Avg. per night
View Deal
Smile Hotel Sasebo
Smile Hotel Sasebo

Smile Hotel Sasebo

8-8 Tokiwacho, Sasebo, Japan
1.6 mi from city centre
Free Wi-Fi
$42
Avg. per night
View Deal
Guesthouse Wasabi
Guesthouse Wasabi

Guesthouse Wasabi

2375 Ashibecho Hakozakinakayamafure, Iki, Japan
4.9 mi from city centre
Free Wi-Fi
Parking
$44
Avg. per night
View Deal
Hotel Cuore Nagasaki Ekimae
Hotel Cuore Nagasaki Ekimae

Hotel Cuore Nagasaki Ekimae

7-3 Daikokumachi, Nagasaki, Nagasaki, Japan
3.3 mi from city centre
Free Wi-Fi
$44
Avg. per night
View Deal
Hotel Wing Port Nagasaki
Hotel Wing Port Nagasaki

Hotel Wing Port Nagasaki

9-2 Daikoku-Cho, Nagasaki, Japan
3.3 mi from city centre
Free Wi-Fi
$45
Avg. per night
View Deal
Business Royal Hotel Nagasaki
Business Royal Hotel Nagasaki

Business Royal Hotel Nagasaki

4-28 Chikugomachi, Nagasaki, Japan
3.4 mi from city centre
Free Wi-Fi
$45
Avg. per night
View Deal
Hotel Belleview Nagasaki Dejima
Hotel Belleview Nagasaki Dejima

Hotel Belleview Nagasaki Dejima

1-20 Edo-Machi, Nagasaki, Japan
3.6 mi from city centre
Free Wi-Fi
$46
Avg. per night
View Deal
Sunwest Hotel Sasebo
Sunwest Hotel Sasebo

Sunwest Hotel Sasebo

1-15 Motoshima-Cho, Sasebo, Japan
1.8 mi from city centre
$46
Avg. per night
View Deal
Hotel Saint Paul Nagasaki
Hotel Saint Paul Nagasaki

Hotel Saint Paul Nagasaki

Yon-Jyuroku, Nagasaki, Japan
2.2 mi from city centre
Free Wi-Fi
$46
Avg. per night
View Deal

Hotel prices in Nagasaki Prefecture

Get a sense of the average price and most popular properties to stay in Nagasaki Prefecture to help you budget for your trip accordingly. Hotels that are booked the most in each class receive the “Most popular” badge. Hotels with the “Best value” badge are the most popular hotels in Nagasaki Prefecture at attractive prices. Price data was last updated on October 23, 2025.
We've come across the following hotels in Nagasaki Prefecture with different price and hotel class options. We've highlighted the most popular properties according to our users as well as the best value within each hotel class.
4 stars +
Hotel New Nagasaki
Hotel New Nagasaki

Hotel New Nagasaki

14-5 Daikoku-Machi, Nagasaki, Japan
$77
View Deal
Hotel Europe Huis Ten Bosch
Hotel Europe Huis Ten Bosch

Hotel Europe Huis Ten Bosch

Huis Ten Bosch 7-7, Sasebo, Japan
$196
View Deal
The Global View Nagasaki
The Global View Nagasaki

The Global View Nagasaki

2-26 Takaramachi, Nagasaki, Japan
$73
View Deal
Hotel Okura Jr Huis Ten Bosch
Hotel Okura Jr Huis Ten Bosch

Hotel Okura Jr Huis Ten Bosch

10 Huis Ten Bosch Cho, Sasebo, Japan
$94
View Deal
Hotel Monterey Nagasaki
Hotel Monterey Nagasaki

Hotel Monterey Nagasaki

1-22 Oura-machi, Nagasaki, Japan
$47
View Deal
3 stars
Iki Marina Hotel
Iki Marina Hotel

Iki Marina Hotel

Gonoracho Gonora 205-1, Iki, Japan
$76
View Deal
Luke Plaza Hotel
Luke Plaza Hotel

Luke Plaza Hotel

17-15 Enouramachi, Nagasaki, Japan
$65
View Deal
Toyoko Inn Tsushima Izuhara
Toyoko Inn Tsushima Izuhara

Toyoko Inn Tsushima Izuhara

771-1 Imayashiki, Izuhara-Machi, Tsushima, Japan
$61
View Deal
Dormy Inn Nagasaki Shinchichukagai
Dormy Inn Nagasaki Shinchichukagai

Dormy Inn Nagasaki Shinchichukagai

7-24 Douza-Machi, Nagasaki, Japan
$66
View Deal
Richmond Hotel Nagasaki Shianbashi
Richmond Hotel Nagasaki Shianbashi

Richmond Hotel Nagasaki Shianbashi

6-38 Motoshikkuimachi, Nagasaki, Japan
$41
View Deal
2 stars and under
Nagasaki House Burabura
Nagasaki House Burabura

Nagasaki House Burabura

2190-11 Motegi-Machi, Nagasaki, Japan
$36
View Deal
Temple Stay Tsushima Seizanji
Temple Stay Tsushima Seizanji

Temple Stay Tsushima Seizanji

1453 Kokubu Izuharamachi, Tsushima, Japan
$72
View Deal
Hostel Casa Noda
Hostel Casa Noda

Hostel Casa Noda

3F, 6-1 Motofuna-Machi, Nagasaki, Japan
$38
View Deal
Daemado Hotel Hitakatsu
Daemado Hotel Hitakatsu

Daemado Hotel Hitakatsu

960, Aza Daranoki, Hitakatsu, Tsushima, Japan
$59
View Deal
Casa Blanca Guesthouse
Casa Blanca Guesthouse

Casa Blanca Guesthouse

7-16, Dozamachi, Nagasaki, Japan
$32
View Deal

Other accommodations in Nagasaki Prefecture

Find the perfect hostel, theme hotel, or vacation rental for your stay in Nagasaki Prefecture. There are 936 hotels in Nagasaki Prefecture and price data was last updated on October 23, 2025. The average price for a stay in Nagasaki Prefecture is $142/night.
Hostel Casa Noda
Hostel Casa Noda

Hostel Casa Noda

3F, 6-1 Motofuna-Machi, Nagasaki, Japan
3.5 mi from city centre
Free Wi-Fi
$38
Avg. per night
View Deal
Mezame Hostel
Mezame Hostel

Mezame Hostel

11-2 Mezame-Machi, Nagasaki, Japan
2.5 mi from city centre
Free Wi-Fi
Air Conditioning
$61
Avg. per night
View Deal
Casa Blanca Guesthouse
Casa Blanca Guesthouse

Casa Blanca Guesthouse

7-16, Dozamachi, Nagasaki, Japan
4.0 mi from city centre
Free Wi-Fi
$32
Avg. per night
View Deal

Where to stay in Nagasaki Prefecture

Explore different neighborhoods and areas within Nagasaki Prefecture to find the perfect location for your stay. Map data was last updated on October 23, 2025.
Scroll through the map to find hotels close to the Nagasaki Prefecture neighborhood(s) you plan on visiting. More information on a given hotel can be accessed by clicking the hotel's name within the map.

Facts about staying in Nagasaki Prefecture

Find useful tips and insights about staying in Nagasaki Prefecture to help you make the most of your experience. FAQs were last updated on October 23, 2025.

  • Where is the best place to stay in Nagasaki Prefecture?

    You can find several places worth visiting in Nagasaki Prefecture. Nagasaki, Sasebo, and Tsushima are some of the most popular amongst our users.

  • What are the best hotels in Nagasaki Prefecture?

    Candeo Hotels Nagasaki Shinchi Chinatown, rated with a score of 8.7 from 3,388 reviewers, is one of the most popular hotels in Nagasaki Prefecture. Other top stays include Yumihari-no-Oka Hotel, with an average rating of 8.6 from 339 reviewers, and Sasebo Washington Hotel, with a score of 7.6 from 1,500 reviewers.

  • What is a good hotel near Huis Ten Bosch?

    Hotel Nikko Huis Ten Bosch is a popular hotel near Huis Ten Bosch that is highly recommended, with a score of 8.5 across 2,609 reviews.

  • What is a good hotel in Nagasaki Prefecture near Nagasaki Railway Station?

    The most popular hotel near Nagasaki Railway Station is Candeo Hotels Nagasaki Shinchi Chinatown, with 3,388 HotelsCombined users scoring it 8.7/10.

  • Is there a good hotel near Nagasaki Chinatown?

    Close to Nagasaki Chinatown you will find Candeo Hotels Nagasaki Shinchi Chinatown, which has a rating of 8.7 over 3,388 HotelsCombined reviews.

  • What is the cheapest city to visit in Nagasaki Prefecture?

    When considering a trip to Nagasaki Prefecture, keep in mind that the 1st cheapest city, Unzen, offers the most budget-friendly accommodations, with an average per night cost of $180. The second cheapest city, Sasebo, also provides an affordable option, with an average per night cost of $140.

  • What is the most popular city in Nagasaki Prefecture to stay in?

    The majority of our users searched for a place to stay in Nagasaki, making it the most popular city in Nagasaki Prefecture. The second most popular city in Nagasaki Prefecture is Sasebo, followed by Tsushima.

  • What is the cheapest city to visit in Nagasaki Prefecture?

    The most popular hotel chain in Nagasaki Prefecture is Dormy Inn. Though our users also frequently search for accommodations at Okura Hotels & Resorts or Marriott Hotels - Marriott Bonvoy during their stay in Nagasaki Prefecture.

  • What are the most popular landmarks to visit in Nagasaki Prefecture?

    The top three landmarks in Nagasaki Prefecture are:
    • Huis Ten Bosch, which you can visit while staying in Sasebo
    • Nagasaki Railway Station, which you can visit while staying in Nagasaki
    • Nagasaki Chinatown, which you can visit while staying in Nagasaki

See more FAQs

Find better results for your stay in Nagasaki Prefecture

Search cheap hotels with HotelsCombined. Use the hotel finder to search for the cheapest hotel deal for all major destinations around the world. HotelsCombined searches hundreds of hotel booking sites to help you find hotels and book hotels that suit you best. Since HotelsCombined searches many hotel sites at once, you can find discount hotels quickly, including Hotels Under $50 and Hotels Under $100. Discover hotel discounts now and make your hotel reservation today.